Multiple updates from rc2 release:

Multiple updates from rc2 release:

- Update daffodilVersion from 3.2.1 to 3.3.0.
- Add plugins to project/plugins.sbt.
  - These plugins allow for checking dependencies for updates, CVEs and viewing the tree of dependencies.
- Update scalaVersion from 2.12.13 to 2.12.15.
  - Can move to 2.13.8 at some point not sure when we want to do this however.
- Update "logback-classic" version from 1.2.3 to 1.2.11 to fix CVEs.
- Update "com.microsoft.java.debug.core" version from 0.31.1 to 0.35.0.
- Update "fs2-io" version from 3.0.4 to 3.0.6.
  - Updating to 3.2.5 breaks the build.
- Update "decline-effect" from 2.1.0 to 2.2.0.
- Update "log4cats-slf4j" from 2.1.0 to 2.1.1.
  - Updating to 2.2.0 breaks the build.
  - CVEs seem to be false positives here.
- Add dependencyOverrides for commons-lang3 to fix a CVE item.
- Update bin.NOTICE files as some of the incorated projects NOTICE's were updated.